CDS

Accession Number TCMCG010C06906
gbkey CDS
Protein Id XP_016559903.1
Location join(137151206..137151469,137153079..137153555,137153818..137154028,137154112..137154269,137154353..137154423,137154581..137154686,137154837..137154920,137155135..137155719,137155825..137155888,137157058..137157185,137157286..137157339,137157624..137157720,137158858..137159093,137159185..137159271,137160398..137160463,137160553..137160626,137160945..137161053)
Gene LOC107859414
GeneID 107859414
Organism Capsicum annuum

Protein

Length 956aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016704417.1
Definition PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category K
Description Double-stranded RNA binding motif
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K18998        [VIEW IN KEGG]
EC 3.1.3.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004647        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0004722        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008420        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009738        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070940        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATAAATCGGTGGTGATCTTGTATGAAGGAGAAAGAATGGTGGGAGAAGTGGAATTGTACGGTGAAAACGGTGCCGTATGGGGTGAGAAGGTAATAAAGATAAGTCACTATTCGGCACCAAGTGAGAGATGTCCACCACTGGCAGTGCTACATACAGTTACTAGTGGAATAAGCTTCAAATTGGAACCTACAAAATCAAAGTCGCTGAACCAAGACTCGCCGCTCATTCTTTTGCACTCAACATGTCTCAGAGATAACAAGACTGCAGTGATGTCACTTGGAAGAGAAGAGCTTCATTTAGTCGCCATGCAGTCTAAGAATTTTGGAGGACAGTGTCCTTGCTTTTGGGGATTTAAGGTTGCGCCAGGACTTTATGATTATTGTCTAACAATGCTAAACCTCAGGTGTCTTGGCATTGTGTTTGATCTTGATGAGACACTCATAGTTGCCAACACAATGCGTTCATTTGAGGATAGAATAGAGGCCTTGCAGCGGAAAATAAATTCAGAGTCAGATCCGCAGCGTGCCTCTGCTATGATGGCTGAGGTCAAGCGTTATCAGGAGGATAAAATTATTTTAAAGCAATATGCCGAAAGTGATCAGATTGTTGACAATGGAAAGGTGATCAAATCTCAGTCTGAGGTTGTCCTGGCGTTGTCTGATAATCACCAAACTATTGTCAGACCCCTGATTAGGTTGCAAGATAGAAACATTATTCTTACTCGTATTAATCCAACGATCCGTGATACTAGTGTTCTCGTGAGATTGAGACCTGCCTGGGAGGAACTCCGAAGCTATCTGACTGCAAAGGGTAGGAAGCGCTTTGAAGTTTATGTATGCACAATGGCTGAAAGAGATTATGCTTTAGAAATGTGGCGGCTTCTTGATCCGGATTCAAACTTGATTAGCTCAAATGAACTCTTGGATCGTATTGTCTGTGTCAAGTCTGGCTCGAGGAAATCTTTGTTCAATGTATTCCAAGATGGAAATTGTCATCCTAAGATGGCATTGGTGATTGATGATCGCTTGAAAGTGTGGGATGAGAAGGATCAACCAAGAGTGCATGTTGTTCCTGCATTTGCTCCATATTTTGCCCCTCAAGCTGAAGGCAACAATTCTGTTCCTGTCCTATGTGTTGCCAGAAATGTAGCCTGCAATGTCAGGGGTGGTTATTTCAAAGATTTTGATGAAGGCCTATTACAGCGTATATCTGAAGTTGTGTATGAAGATGATATTAAGCAAGTTCCTTCTGCTCCTGATGTTAGCAACTATTTGATTTCAGAGGATGAACCTTCAGCTGTAAACGGGAATAAAGATTCACTTGGATTTGATGGAATGGCTGATAATGAGGTCGAAAGGAGACTAAAGGAAGCACTGTTGGCTTCAACAAGTGTTCCTTCTCAAATGACAAATTTGGATCCAAGACTTGCACCAGCTCTCCAGTACTCTGTCCCACCTGTTATTTCACAGCCAACCATACAAGGGCCAGTGGTGCCTTTTCCTGCTCAGCATCTCCCTCAAGGGACTTCTGTACTTAAATCATCGGTGACTCCAATAAGTCCTCAGGACACAAGCTTGCAAAGTTCTCCTGCTAGGGAAGAGGGTGAGGTACCAGAATCTGAATTAGATCCTGATACAAGGAGGAGATTACTTATATTGCAACACGGTCAAGACACGAGAGATCAAGTATCAAGTGAACCAAAGTTCCCTATGGGGACTCCATTACAAGTGTCTGTGCCACCTCGGGTGCAGCCACATGGTTGGTTTCCAGCTGAGGAAGAGATGAGCCCTAGGCAACTTAATCGAGCCTTGCCTCCCAAGGAATTTCCTTTAAATGCAGAGTCTATGCATATTAACAAACATCGGCCTCCTCATCCACCTTTTCTTCCCAAAATGGAGATCTCTATGCCATCTGATAGAGGTCTTTTTGAGAGCCAGAGGTTGCCAAAAGAGGTATTCCCTCGGGATGACAGGATGAGATTTTCCCAGTCACAACCTAGCTTTCGTCCAGCGCCAGTTGAGGAAGTCTCCTTGGGTCGGTCGTCTTCCAGCAACAGGGATCTGGACCTTGAACCTGGACATGATCCATATTTGGAAACACCTGCTGGAGCTTTACAAGATATCGCATTCAAGTGTGGAACGAAGGTCGAATTCAAATCAGCTTTGTTTTCAAGTCCAGAACTGCAGTTCTCCTTGGAGGTGTCATTTGCAGGAGAAAAAATTGGAGAAGGAATTGGCCGGACGAGAAGGGAAGCCCAACAACGGGCTGCTGAGGAATCTCTTATGAATCTGGCAGACAAATACTTGTCACGTCTCAAACCTGATTCCAGTTCCACATTTGGTGATGGATTTAGGTTTCCAAATGCAAGTGATAACGGGTTTGTTGACAACATGAGTCCTTTTGGGTATCAAACATATCCGAAGGAGGATCGTGTCTCACATTCTTTTGCATCAGAACCTCCCAGAGTGTTGGACCCAAGGTTTGAGTTTTTTAAGAAGTCGGTGGGTTCAGTTGGCGCCCTAAGAGAACTATGCGCGATTGAAGGACTTGGTTTGGCATTCCAAACTCAGCCTCAACCAGCTAATCCGGGCCAGAAAAGTGAAATATACGCCCAGGTTGTGGAAATTGATGGACGCGTATTTGGCAAAGGAATTGGTTCAACATGGGATGATGCTAAAACACAGGCTGCTGAAAGGGCTCTTGTTGCTTTGAAGTCTGAGCTGGGCCAGTTTCCTCACAAGCGTCAGGGTTCTCCGAGATCATTGCAGCAGGGATTTTCCAATAAAAGGTTGAAACCTGAGTATTCTCGGAGTATGCAGCGAGTATCATCTTCTGCTAGATTTCCGAAGAACCCATCTATGCCATGA
Protein:  
MYKSVVILYEGERMVGEVELYGENGAVWGEKVIKISHYSAPSERCPPLAVLHTVTSGISFKLEPTKSKSLNQDSPLILLHSTCLRDNKTAVMSLGREELHLVAMQSKNFGGQCPCFWGFKVAPGLYDYCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSESDPQRASAMMAEVKRYQEDKIILKQYAESDQIVDNGKVIKSQSEVVLALSDNHQTIVRPLIRLQDRNIILTRINPTIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPDSNLISSNELLDRIVCVKSGSRKSLFNVFQDGNCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYFAPQAEGNNSVPVLCVARNVACNVRGGYFKDFDEGLLQRISEVVYEDDIKQVPSAPDVSNYLISEDEPSAVNGNKDSLGFDGMADNEVERRLKEALLASTSVPSQMTNLDPRLAPALQYSVPPVISQPTIQGPVVPFPAQHLPQGTSVLKSSVTPISPQDTSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDQVSSEPKFPMGTPLQVSVPPRVQPHGWFPAEEEMSPRQLNRALPPKEFPLNAESMHINKHRPPHPPFLPKMEISMPSDRGLFESQRLPKEVFPRDDRMRFSQSQPSFRPAPVEEVSLGRSSSSNRDLDLEPGHDPYLETPAGALQDIAFKCGTKVEFKSALFSSPELQFSLEVSFAGEKIGEGIGRTRREAQQRAAEESLMNLADKYLSRLKPDSSSTFGDGFRFPNASDNGFVDNMSPFGYQTYPKEDRVSHSFASEPPRVLDPRFEFFKKSVGSVGALRELCAIEGLGLAFQTQPQPANPGQKSEIYAQVVEIDGRVFGKGIGSTWDDAKTQAAERALVALKSELGQFPHKRQGSPRSLQQGFSNKRLKPEYSRSMQRVSSSARFPKNPSMP